- recipe savage
SAVAGE (Strain Aware VirAl GEnome assembly) reconstructs individual (viral) haplotypes from a mixed sample.
- Homepage
https://github.com/HaploConduct/HaploConduct/tree/master/savage
- License
GPL v3
- Recipe
- package savage¶
-
- Versions
0.4.2-1
,0.4.2-0
,0.4.1-0
,0.4.0-2
,0.4.0-1
,0.4.0-0
,0.3.0-0
,0.2.1-1
,0.2.1-0
- Depends
boost
>=1.70.0,<1.70.1.0a0
kallisto
>=0.43.0
libgcc-ng
>=7.5.0
libstdcxx-ng
>=7.5.0
python
>=2.7,<2.8.0a0
python_abi
2.7.* *_cp27mu
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install savage
and update with:
conda update savage
or use the docker container:
docker pull quay.io/biocontainers/savage:<tag>
(see savage/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/savage/README.html)