savage

downloads

SAVAGE (Strain Aware VirAl GEnome assembly) reconstructs individual (viral) haplotypes from a mixed sample.

Home https://bitbucket.org/jbaaijens/savage
Versions 0.2.1, 0.3.0
License GPL v3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/savage

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install savage

and update with:

conda update savage

docker

A Docker container is available at https://quay.io/repository/biocontainers/savage.