recipe scagaire

Scagaire allows you to take in gene predictions from a metagenomic sample and filter them by bacterial/pathogenic species

Homepage:

https://github.com/quadram-institute-bioscience/scagaire

License:

GPLv3

Recipe:

/scagaire/meta.yaml

package scagaire

Versions:

0.0.4-0

Depends:

• biopython >=1.68

• mash

• python >=3

• pyyaml

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install scagaire

and update with:

conda update scagaire

or use the docker container:

docker pull quay.io/biocontainers/scagaire:<tag>

(see scagaire/tags for valid values for <tag>)

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Link to this page

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