recipe scallop

Scallop is a reference-based transcriptome assembler for RNA-seq

Homepage:

https://github.com/Kingsford-Group/scallop

License:

BSD 3-Clause License

Recipe:

/scallop/meta.yaml

package scallop

Versions:

0.10.5-3,  0.10.5-2,  0.10.5-1,  0.10.5-0,  0.10.4-2,  0.10.4-1,  0.10.4-0

Depends:

• boost-cpp >=1.74.0,<1.74.1.0a0

• htslib >=1.14,<1.15.0a0

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install scallop

and update with:

conda update scallop

or use the docker container:

docker pull quay.io/biocontainers/scallop:<tag>

(see scallop/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/scallop/README.html)