recipe scallop

Scallop is a reference-based transcriptome assembler for RNA-seq

Homepage

https://github.com/Kingsford-Group/scallop

License

BSD 3-Clause License

Recipe

/scallop/meta.yaml

package scallop

Versions

0.10.5-1,  0.10.5-0,  0.10.4-2,  0.10.4-1,  0.10.4-0

Depends

• boost-cpp >=1.74.0,<1.74.1.0a0

• htslib >=1.12,<1.13.0a0

• libgcc-ng >=9.3.0

• libstdcxx-ng >=9.3.0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install scallop

and update with:

conda update scallop

or use the docker container:

docker pull quay.io/biocontainers/scallop:<tag>

(see scallop/tags for valid values for <tag>)

Download stats

Link to this page

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