recipe semeta

SeMeta is a new software for taxonomic assignment of metagenomic reads. It supports both single-end and paired-end reads. The software is implemented in C++

Homepage

http://it.hcmute.edu.vn/bioinfo/metapro/SeMeta.html

License

GPL-3

Recipe

/semeta/meta.yaml

package semeta

(downloads) docker_semeta

Versions

1.0-0

Depends blast

Depends libgcc

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install semeta

and update with:

conda update semeta

or use the docker container:

docker pull quay.io/biocontainers/semeta:<tag>

(see semeta/tags for valid values for <tag>)

Notes

Databases are required. Please see the project homepage.