recipe sensv

SENSV

Homepage

https://github.com/HKU-BAL/SENSV

License

AGPLv3

Recipe

/sensv/meta.yaml

package sensv

Versions

1.0.4-1,  1.0.4-0,  1.0.2-1,  1.0.2-0,  v1.0.1-0

Depends

• grabix 0.1.8.*

• htslib 1.10.2.*

• intervaltree 3.0.2.*

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

• minimap2 2.17.*

• pandas 1.0.1.*

• pigz 2.3.4.*

• pyfaidx 0.5.8.*

• pypy3.6 7.3.0.*

• pysam 0.15.3.*

• samtools 1.7.*

• scipy 1.4.1.*

• survivor 1.0.6.*

• vcflib 1.0.0.*

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install sensv

and update with:

conda update sensv

or use the docker container:

docker pull quay.io/biocontainers/sensv:<tag>

(see sensv/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/sensv/README.html)