Extract 454 Genome Sequencer reads from a SFF file and convert them into a FASTQ formatted output

Home https://github.com/indraniel/sff2fastq
Versions 0.9.2
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/sff2fastq
Links biotools: sff2fastq

The program sff2fastq extracts read information from a SFF file, produced by the 454 genome sequencer, and outputs the sequences and quality scores in a FASTQ format.


With an activated Bioconda channel (see 2. Set up channels), install with:

conda install sff2fastq

and update with:

conda update sff2fastq


A Docker container is available at https://quay.io/repository/biocontainers/sff2fastq.