recipe sga

SGA - String Graph Assembler. SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.

Homepage:

https://github.com/jts/sga

License:

GPL / GPLv3

Recipe:

/sga/meta.yaml

Links:

biotools: sga

package sga

(downloads) docker_sga

Versions:
0.10.15-80.10.15-70.10.15-60.10.15-50.10.15-40.10.15-30.10.15-20.10.15-10.10.15-0

0.10.15-80.10.15-70.10.15-60.10.15-50.10.15-40.10.15-30.10.15-20.10.15-10.10.15-00.10.13-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install sga

and update with:

conda update sga

or use the docker container:

docker pull quay.io/biocontainers/sga:<tag>

(see sga/tags for valid values for <tag>)

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