recipe shapeit4

fast and accurate method for estimation of haplotypes (phasing)

Homepage

https://odelaneau.github.io/shapeit4/

License

MIT

Recipe

/shapeit4/meta.yaml

Links

doi: 10.1101/493403

package shapeit4

Versions

4.2.2-0,  4.2.1-0,  4.2.0-1,  4.2.0-0,  4.1.3-1,  4.1.3-0,  4.1-0,  4.0-0

Depends

• boost-cpp >=1.74.0,<1.74.1.0a0

• bzip2 >=1.0.8,<2.0a0

• htslib 1.11.*

• libgcc-ng >=9.4.0

• libstdcxx-ng >=9.4.0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install shapeit4

and update with:

conda update shapeit4

or use the docker container:

docker pull quay.io/biocontainers/shapeit4:<tag>

(see shapeit4/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/shapeit4/README.html)