recipe siann

SIANN was created to allow creation of local small sets of bacterial/viral genomes to perform strain level differentiation from fastq data

Homepage

https://github.com/signaturescience/siann/wiki

License

GPL3

Recipe

/siann/meta.yaml

package siann

Versions

1.3-0,  1.2-1,  1.2-0,  1.1-0,  1.0-0

Depends

• bowtie2

• mummer

• parallel

• python 2.*

• scipy

• time

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install siann

and update with:

conda update siann

or use the docker container:

docker pull quay.io/biocontainers/siann:<tag>

(see siann/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/siann/README.html)