- recipe simba
SIMBA - SIngle-cell eMBedding Along with features
- Homepage:
- License:
BSD / BSD-3
- Recipe:
- package simba¶
-
- Versions:
1.1-0
,1.0-0
,0.1-0
,0.1a-0
- Depends:
adjusttext
>=0.7.3
anndata
>=0.7.4
kneed
>=0.7
matplotlib-base
>=3.3
numpy
>=1.17.0
pandas
>=1.0,!=1.1
pybedtools
>=0.8.0
scikit-learn
>=0.19
scikit-misc
>=0.1.3
scipy
>=1.4
seaborn
>=0.11
simba_pbg
>=1.1
umap-learn
>=0.3.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install simba
and update with:
conda update simba
or use the docker container:
docker pull quay.io/biocontainers/simba:<tag>
(see simba/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/simba/README.html)