recipe skesa

Strategic Kmer Extension for Scrupulous Assemblies

Homepage:

https://ftp.ncbi.nlm.nih.gov/pub/agarwala/skesa

License:

Public Domain

Recipe:

/skesa/meta.yaml

package skesa

Versions:

2.4.0-0,  2.3.0-2,  2.3.0-1,  2.3.0-0,  2.2-2,  2.2-1,  2.1-0

Depends:

• boost >=1.70.0,<1.70.1.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• zlib >=1.2.11,<1.3.0a0

Required By:

• proksee

• shovill-se

• shovill

• nullarbor

• riboseed

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install skesa

and update with:

conda update skesa

or use the docker container:

docker pull quay.io/biocontainers/skesa:<tag>

(see skesa/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/skesa/README.html)