- recipe snp-pileup
Compute SNP pileup at reference positions in one or more input bam files. Output is ready for the R package facets
- Homepage:
- License:
MIT / MIT
- Recipe:
- package snp-pileup¶
-
- Versions:
0.6.2-5
,0.6.2-4
,0.6.2-3
,0.6.2-2
,0.6.2-1
,0.6.2-0
,0.6.1-1
,0.6.1-0
,0.5.14-3
,0.6.2-5
,0.6.2-4
,0.6.2-3
,0.6.2-2
,0.6.2-1
,0.6.2-0
,0.6.1-1
,0.6.1-0
,0.5.14-3
,0.5.14-2
,0.5.14-1
,0.5.14-0
,v0.5.14-0
- Depends:
htslib
>=1.17,<1.18.0a0
libgcc-ng
>=12
libstdcxx-ng
>=12
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install snp-pileup
and update with:
conda update snp-pileup
or use the docker container:
docker pull quay.io/biocontainers/snp-pileup:<tag>
(see snp-pileup/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/snp-pileup/README.html)