- recipe snpeff
Genetic variant annotation and effect prediction toolbox
- Homepage:
- License:
LGPLv3
- Recipe:
- Links:
biotools: snpeff
- package snpeff¶
-
- Versions:
5.1-2
,5.1-1
,5.1-0
,5.1d-0
,5.0-1
,5.0-0
,4.5covid19-2
,4.5covid19-1
,4.5covid19-0
,5.1-2
,5.1-1
,5.1-0
,5.1d-0
,5.0-1
,5.0-0
,4.5covid19-2
,4.5covid19-1
,4.5covid19-0
,4.3.1t-5
,4.3.1t-4
,4.3.1t-3
,4.3.1t-2
,4.3.1t-1
,4.3.1t-0
,4.3.1r-0
,4.3.1q-0
,4.3.1p-1
,4.3.1p-0
,4.3.1o-0
,4.3.1m-0
,4.3.1k-0
,4.3-3
,4.3-2
,4.3-1
,4.3-0
,4.3k-0
,4.3i-0
,4.3g-0
,4.3b-0
,4.2-0
,4.1l-8
,4.1l-7
,4.1l-6
,4.1l-5
,4.1l-4
,4.1l-3
,4.1l-2
,4.1l-1
,4.1l-0
,3_6-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install snpeff
and update with:
conda update snpeff
or use the docker container:
docker pull quay.io/biocontainers/snpeff:<tag>
(see snpeff/tags for valid values for
<tag>
)
Notes¶
The tool is available as command `snpEff`. Note that the package version is slightly different from upstream, this is to make sure conda will order the package versions correctly.
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/snpeff/README.html)