recipe snpiphy

An automated snp phylogeny pipeline

Homepage

https://github.com/bogemad/snpiphy

License

GPL / GPLv3

Recipe

/snpiphy/meta.yaml

package snpiphy

Versions

0.5-0,  0.3-1,  0.3-0,  0.2-0,  0.1-1,  0.1-0

Depends

• biopython

• gubbins

• numpy

• pandas

• python >=3

• snippy

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install snpiphy

and update with:

conda update snpiphy

or use the docker container:

docker pull quay.io/biocontainers/snpiphy:<tag>

(see snpiphy/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/snpiphy/README.html)