soapdenovo2

downloads

SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes.

Home http://soap.genomics.org.cn/soapdenovo.html
Versions 2.40
License GPL
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/soapdenovo2

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install soapdenovo2

and update with:

conda update soapdenovo2

docker

A Docker container is available at https://quay.io/repository/biocontainers/soapdenovo2.