recipe socru

Order and orientation of complete bacterial genomes

Homepage:

https://github.com/quadram-institute-bioscience/socru

License:

GPLv3

Recipe:

/socru/meta.yaml

package socru

Versions:

2.2.4-1,  2.2.4-0,  2.2.3-0,  2.2.2-0,  2.2.1-0,  2.1.7-1,  2.1.7-0,  2.1.6-0,  2.1.4-0, 

2.2.4-1,  2.2.4-0,  2.2.3-0,  2.2.2-0,  2.2.1-0,  2.1.7-1,  2.1.7-0,  2.1.6-0,  2.1.4-0,  2.1.2-0,  2.1.1-0,  2.1.0-0,  2.0.0-0,  1.0.1-0,  1.0.0-0,  0.0.5-0

Depends:

• barrnap

• biopython >=1.68,<1.78

• blast

• matplotlib-base

• numpy

• python >=3,<3.9

• pyyaml

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install socru

and update with:

conda update socru

or use the docker container:

docker pull quay.io/biocontainers/socru:<tag>

(see socru/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/socru/README.html)