recipe sparseassembler

A sparse k-mer graph based, memory-efficient genome assembler

Homepage

https://github.com/yechengxi/SparseAssembler

License

GPL / GPL-3.0

Recipe

/sparseassembler/meta.yaml

package sparseassembler

(downloads) docker_sparseassembler

Versions

20160205-4, 20160205-3, 20160205-2, 20160205-1, 20160205-0

Depends
  • libgcc-ng >=4.9

  • libstdcxx-ng >=4.9

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install sparseassembler

and update with:

conda update sparseassembler

or use the docker container:

docker pull quay.io/biocontainers/sparseassembler:<tag>

(see sparseassembler/tags for valid values for <tag>)