recipe spectrassembler

Tool (experimental) to compute layout from overlaps with spectral algorithm

Homepage

https://github.com/antrec/spectrassembler

License

MIT

Recipe

/spectrassembler/meta.yaml

package spectrassembler

(downloads) docker_spectrassembler

Versions

0.0.1a1-3, 0.0.1a1-2, 0.0.1a1-1, 0.0.1a1-0

Depends biopython

Depends bwa

Depends minimap

Depends numpy

Depends poa

Depends python

>=2.7,<2.8.0a0

Depends scipy

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install spectrassembler

and update with:

conda update spectrassembler

or use the docker container:

docker pull quay.io/biocontainers/spectrassembler:<tag>

(see spectrassembler/tags for valid values for <tag>)