- recipe sprai
Sprai (single-pass read accuracy improver) is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads; instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.
- Homepage:
- License:
MIT License
- Recipe:
- package sprai¶
-
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install sprai
and update with:
conda update sprai
or use the docker container:
docker pull quay.io/biocontainers/sprai:<tag>
(see sprai/tags for valid values for
<tag>
)
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Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/sprai/README.html)