sprai¶
Sprai (single-pass read accuracy improver) is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads; instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.
| Home | http://zombie.cb.k.u-tokyo.ac.jp/sprai/ |
| Versions | 0.9.9.23 |
| License | MIT License |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/sprai |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install sprai
and update with:
conda update sprai
A Docker container is available at https://quay.io/repository/biocontainers/sprai.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/sprai/README.html)
