recipe srnaminer

sRNAminer: a Multifunctional Toolkit for Next Generation Sequencing Small RNA Data Mining

Homepage:

https://github.com/kli28/sRNAminer

License:

GPL3

Recipe:

/srnaminer/meta.yaml

sRNAminer-A multifunctional toolkit for sRNA analysis.

package srnaminer

Versions:

1.0.5-0,  1.0.4-0,  1.0.3-0

Depends:

• biopython

• blast

• bowtie

• fasta3

• numpy

• openjdk

• pandas

• parallel

• python >=3

• samtools

• viennarna

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install srnaminer

and update with:

conda update srnaminer

or use the docker container:

docker pull quay.io/biocontainers/srnaminer:<tag>

(see srnaminer/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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