recipe start-asap

Prepare project directory and project sheet for ASA3P

Homepage:

http://github.com/quadram-institute-bioscience/start-asap/

License:

MIT

Recipe:

/start-asap/meta.yaml

Links:

biotools: start-asap

Prepare the input directory for 'ASA3P', creating automatically a _config.xls_ file from the reads provided. Requires one or more reference files (.gbk recommended) and a directory with FASTQ files (.fq or .fastq, gzipped). Metadata can be supplied via command line or with a JSON file.

package start-asap

Versions:

1.3.0-1,  1.3.0-0,  1.2.0-0,  1.0.0-0

Depends:

• perl

• perl-getopt-long

• perl-json-pp

• perl-pod-usage

• perl-spreadsheet-writeexcel

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install start-asap

and update with:

conda update start-asap

or use the docker container:

docker pull quay.io/biocontainers/start-asap:<tag>

(see start-asap/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/start-asap/README.html)