recipe strandphaser

Phase Strand-seq data

Homepage:

https://github.com/daewoooo/StrandPhaseR/

License:

MIT

Recipe:

/strandphaser/meta.yaml

R Package for phasing of single cell Strand-seq data

package strandphaser

Versions:

1.0.0-1,  1.0.0-0

Depends:

• bioconductor-biocgenerics

• bioconductor-bsgenome

• bioconductor-fastseg

• bioconductor-genomicalignments

• bioconductor-genomicranges

• bioconductor-rsamtools

• bioconductor-s4vectors

• r-base >=4.2,<4.3.0a0

• r-cowplot

• r-doparallel

• r-foreach

• r-ggplot2

• r-gtools

• r-reshape2

• r-zoo

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install strandphaser

and update with:

conda update strandphaser

or use the docker container:

docker pull quay.io/biocontainers/strandphaser:<tag>

(see strandphaser/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/strandphaser/README.html)