stringtie

downloads

Transcriptome assembly and quantification for RNA-seq

Home http://ccb.jhu.edu/software/stringtie/
Versions 0.97, 1.0.1, 1.0.3, 1.0.4, 1.1.0, 1.1.1, 1.1.2, 1.2.0, 1.2.2, 1.2.3, 1.2.4, 1.3.0, 1.3.3
License Artistic License 2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/stringtie

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install stringtie

and update with:

conda update stringtie

docker

A Docker container is available at https://quay.io/repository/biocontainers/stringtie.