recipe t-coffee

A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence

Homepage:

http://www.tcoffee.org/Projects/tcoffee/

License:

GPL-2.0-only

Recipe:

/t-coffee/meta.yaml

Links:

doi: 10.1006/jmbi.2000.4042

package t-coffee

Versions:

13.45.0.4846264-3,  13.45.0.4846264-2,  13.45.0.4846264-1,  13.45.0.4846264-0,  13.39.0.d675aed-2,  13.39.0.d675aed-1,  13.39.0.d675aed-0,  12.00.7fb08c2-2,  12.00.7fb08c2-1, 

13.45.0.4846264-3,  13.45.0.4846264-2,  13.45.0.4846264-1,  13.45.0.4846264-0,  13.39.0.d675aed-2,  13.39.0.d675aed-1,  13.39.0.d675aed-0,  12.00.7fb08c2-2,  12.00.7fb08c2-1,  12.00.7fb08c2-0,  11.00.8cbe486-0

Depends:

• blast

• clustalo

• clustalw

• consan

• dca

• dialign-tx 1.0.2.*

• kalign2

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• mafft 7.310.*

• muscle

• mustang 3.2.3.*

• pasta

• perl

• phylip

• poa 2.0.*

• prank

• probcons

• probconsrna

• ruby

• sap

• tmalign

• viennarna 2.1.9.*

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install t-coffee

and update with:

conda update t-coffee

or use the docker container:

docker pull quay.io/biocontainers/t-coffee:<tag>

(see t-coffee/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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