recipe tb-profiler

Profiling tool for Mycobacterium tuberculosis to detect drug resistance and lineage from WGS data

Homepage

https://github.com/jodyphelan/TBProfiler

License

GPL3

Recipe

/tb-profiler/meta.yaml

package tb-profiler

Versions

2.3-0, 2.2-1, 2.2-0, 2.1-2, 2.1-1, 2.1-0, 2.0-0

Depends

• pathogen-profiler

• python

• tqdm

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tb-profiler

and update with:

conda update tb-profiler

or use the docker container:

docker pull quay.io/biocontainers/tb-profiler:<tag>

(see tb-profiler/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/tb-profiler/README.html)