recipe thapbi-pict

THAPBI Phytophthora ITS1 Classifier Tool (PICT).

Homepage

https://github.com/peterjc/thapbi-pict

Documentation

https://thapbi-pict.readthedocs.io/en/latest/

License

MIT / MIT

Recipe

/thapbi-pict/meta.yaml

THAPBI Phytophthora ITS1 Classifier Tool (PICT) an ITS1-based diagnostic/profiling tool from the UK BBSRC funded Tree Health and Plant Biosecurity Initiative (THAPBI) Phyto-Threats project, focused on identifying Phytophthora species present in Illumina sequenced environmental samples.

package thapbi-pict

(downloads) docker_thapbi-pict

Versions
0.10.4-00.10.3-00.10.2-00.10.1-00.9.9-00.9.8-00.9.7-00.9.6-00.9.5-0

0.10.4-00.10.3-00.10.2-00.10.1-00.9.9-00.9.8-00.9.7-00.9.6-00.9.5-00.9.4-00.9.3-00.9.2-00.9.1-00.9.0-00.8.4-00.8.2-00.8.1-00.8.0-00.7.11-00.7.10-00.7.9-00.7.8-00.7.7-00.7.6-00.7.5-00.7.4-00.7.3-00.7.2-00.7.1-00.7.0-00.6.15-00.6.14-00.6.13-00.6.11-00.6.10-00.6.9-00.6.8-00.6.7-00.6.6-00.6.5-00.6.4-00.6.3-00.6.1-10.6.1-00.6.0-00.5.8-00.5.7-00.5.6-00.5.5-00.5.4-00.5.1-00.5.0-00.4.19-00.4.18-00.4.17-00.4.15-00.4.13-00.4.12-00.4.11-00.4.9-00.4.8-00.4.7-00.4.6-00.4.4-00.4.2-00.4.1-00.4.0-00.3.11-00.3.10-00.3.9-00.3.8-00.3.7-00.3.4-00.3.1-00.2.5-00.2.3-00.2.2-00.2.1-00.1.12-00.1.10-00.1.6-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install thapbi-pict

and update with:

conda update thapbi-pict

or use the docker container:

docker pull quay.io/biocontainers/thapbi-pict:<tag>

(see thapbi-pict/tags for valid values for <tag>)

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