theta2

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Estimate tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data

Home https://github.com/raphael-group/THetA
Versions 0.7
License Modified MIT (no inclusion in commercial tools)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/theta2

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install theta2

and update with:

conda update theta2

docker

A Docker container is available at https://quay.io/repository/biocontainers/theta2.