- recipe tobias
Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal
- Homepage:
- Documentation:
- License:
MIT
- Recipe:
TOBIAS (Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal) is a collection of command-line bioinformatics tools for performing footprinting analysis on ATAC-seq data.
- package tobias¶
-
- Versions:
0.13.3-0
,0.13.2-1
,0.13.2-0
,0.13.1-0
,0.13.0-0
,0.12.12-0
,0.12.11-0
,0.12.10-1
,0.12.10-0
,0.13.3-0
,0.13.2-1
,0.13.2-0
,0.13.1-0
,0.13.0-0
,0.12.12-0
,0.12.11-0
,0.12.10-1
,0.12.10-0
,0.12.9-0
,0.12.8-0
,0.12.7-0
,0.12.6-0
,0.12.4-0
,0.12.3-0
,0.12.1-0
,0.12.0-0
,0.11.6-1
,0.11.6-0
,0.11.4-0
,0.11.3-0
,0.11.2-0
,0.11.1-0
,0.11.0-0
,0.9.0-0
,0.8.0-0
,0.7.0-0
,0.6.4-0
,0.6.1-0
,0.5.0-0
- Depends:
libgcc-ng
>=10.3.0
matplotlib-base
>=2
numpy
>=1.17.5,<2.0a0
python
>=3.6,<3.7.0a0
python_abi
3.6.* *_cp36m
pyyaml
>=5.1
seaborn
>=0.9.1
svist4get
>=1.2.24
xgboost
>=0.71
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install tobias
and update with:
conda update tobias
or use the docker container:
docker pull quay.io/biocontainers/tobias:<tag>
(see tobias/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/tobias/README.html)