- recipe tpmcalculator
TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files.
- Homepage:
- License:
Public Domain
- Recipe:
- package tpmcalculator¶
-
- Versions:
0.0.4-3
,0.0.4-2
,0.0.4-1
,0.0.4-0
,0.0.3-1
,0.0.3-0
- Depends:
bamtools
>=2.5.1,<2.5.2.0a0
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.13,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install tpmcalculator
and update with:
conda update tpmcalculator
or use the docker container:
docker pull quay.io/biocontainers/tpmcalculator:<tag>
(see tpmcalculator/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/tpmcalculator/README.html)