recipe trimal

A tool for the automated removal of spurious sequences or poorly aligned regions from a multiple sequence alignment

Homepage:

http://trimal.cgenomics.org

License:

GNU General Public License v3 or later (GPLv3+)

Recipe:

/trimal/meta.yaml

Links:

biotools: trimAl

package trimal

Versions:

1.4.1-8,  1.4.1-7,  1.4.1-6,  1.4.1-5,  1.4.1-4,  1.4.1-3,  1.4.1-2,  1.4.1-1,  1.4.1-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

Required By:

• zol

• funannotate

• metaclock

• phylofisher

• plant_tribes_assembly_post_processor

• plant_tribes_gene_family_aligner

• wgdi

• phylophlan

• secapr

• anvio

• gtotree

• pgcgap

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install trimal

and update with:

conda update trimal

or use the docker container:

docker pull quay.io/biocontainers/trimal:<tag>

(see trimal/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/trimal/README.html)