Remove lines from bed file that refer to off-chromosome places.
|License||varies; see http://genome.ucsc.edu/license|
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install ucsc-bedclip
and update with:
conda update ucsc-bedclip
A Docker container is available at https://quay.io/repository/biocontainers/ucsc-bedclip.