Filter cDNA alignments in psl format. Filtering criteria are comparative, selecting near best in genome alignments for each given cDNA and non-comparative, based only on the quality of an individual alignment.
|License||varies; see http://genome.ucsc.edu/license|
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install ucsc-pslcdnafilter
and update with:
conda update ucsc-pslcdnafilter
A Docker container is available at https://quay.io/repository/biocontainers/ucsc-pslcdnafilter.