recipe ufcg

UFCG pipeline provides methods for a genome-wide taxonomic profiling and annotation of your own biological sequences of Fungi.

Homepage:

https://ufcg.steineggerlab.com

Developer docs:

https://github.com/steineggerlab/ufcg

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/ufcg/meta.yaml

Links:

doi: 10.1093/nar/gkac894

package ufcg

Versions:

1.0.4-0,  1.0.3c-0

Depends:

• augustus >=3.5.0

• iqtree

• mafft

• mmseqs2 >=14.7e284

• openjdk >=8

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install ufcg

and update with:

conda update ufcg

or use the docker container:

docker pull quay.io/biocontainers/ufcg:<tag>

(see ufcg/tags for valid values for <tag>)

Download stats

Link to this page

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