- recipe uropa
UROPA (Universal RObust Peak Annotator) is a command line based tool, intended for genomic region annotation from e.g. peak calling. It detects the most appropriate annotation by taking parameters such as feature type, anchor, direction and strand into account. Furthermore, it allows filtering for GTF attribute values, e.g. protein_coding.
- Homepage:
- Documentation:
- License:
MIT / MIT
- Recipe:
- package uropa¶
-
- Versions:
4.0.2-0
,4.0.1-0
,4.0.0-0
,3.5.3-0
,3.5.2-0
,3.5.0-0
,3.4.0-0
,3.3.4-0
,3.3.3-0
,4.0.2-0
,4.0.1-0
,4.0.0-0
,3.5.3-0
,3.5.2-0
,3.5.0-0
,3.4.0-0
,3.3.4-0
,3.3.3-0
,3.3.2-0
,3.3.0-0
,3.2.0-0
,3.1.0-0
,3.0.0-0
,2.0.3-0
,2.0.2a0-2
,2.0.2a0-0
,2.0.0a0-0
,1.2.1-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install uropa
and update with:
conda update uropa
or use the docker container:
docker pull quay.io/biocontainers/uropa:<tag>
(see uropa/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/uropa/README.html)