varscan

downloads

variant detection in massively parallel sequencing data

Home http://dkoboldt.github.io/varscan/
Versions 2.3.7, 2.4.0, 2.4.1, 2.4.2
License The Non-Profit Open Software License version 3.0 (NPOSL-3.0)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/varscan

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install varscan

and update with:

conda update varscan

docker

A Docker container is available at https://quay.io/repository/biocontainers/varscan.