velvet-sc

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Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

Home http://bix.ucsd.edu/projects/singlecell/
Versions 0.7.62
License GPL2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/velvet-sc

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install velvet-sc

and update with:

conda update velvet-sc

docker

A Docker container is available at https://quay.io/repository/biocontainers/velvet-sc.