recipe visceral-evaluatesegmentation

EvaluateSegmentation is a tool that compares two volumes (a test segmentation and a ground truth segmentation) using 22 different metrics that were selected as a result of a comprehensive research into the metrics used in the medical volume segmentations.

Homepage

https://github.com/Visceral-Project/EvaluateSegmentation

License

Apache License, Version 2.0

Recipe

/visceral-evaluatesegmentation/meta.yaml

package visceral-evaluatesegmentation

(downloads) docker_visceral-evaluatesegmentation

Versions

2015.07.03-0, 2015.07.02-1, 2015.07.02-0

Depends jpeg

>=9c,<10a

Depends libgcc-ng

>=7.3.0

Depends libitk

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install visceral-evaluatesegmentation

and update with:

conda update visceral-evaluatesegmentation

or use the docker container:

docker pull quay.io/biocontainers/visceral-evaluatesegmentation:<tag>

(see visceral-evaluatesegmentation/tags for valid values for <tag>)