recipe visor

Haplotype-aware structural variants simulator for short, long and linked reads

Homepage:

https://github.com/davidebolo1993/VISOR.git

License:

LGPL-3.0

Recipe:

/visor/meta.yaml

package visor

Versions:

1.1.2-0

Depends:

• badread >=0.2.0

• mappy >=2.17

• minimap2 >=2.17

• numpy >=1.15.3

• plotly 3.10.0

• pybedtools >=0.8.0

• pyfaidx >=0.5.5.2

• pysam >=0.15.0

• python

• pywgsim >=0.3.3

• samtools >=1.9

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install visor

and update with:

conda update visor

or use the docker container:

docker pull quay.io/biocontainers/visor:<tag>

(see visor/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/visor/README.html)