vsearch

downloads

a versatile open source tool for metagenomics (USEARCH alternative)

Home https://github.com/torognes/vsearch
Versions 1.10.2, 1.11.1, 1.9.5, 1.9.7, 2.0.0, 2.0.2, 2.0.3, 2.3.2, 2.3.4, 2.4.0
License dual-licensed under GPLv3+ or BSD 2-clause
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/vsearch

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install vsearch

and update with:

conda update vsearch

docker

A Docker container is available at https://quay.io/repository/biocontainers/vsearch.