recipe vt

A tool set for manipulating and generating VCF files

Homepage:

https://genome.sph.umich.edu/wiki/Vt

License:

MIT

Recipe:

/vt/meta.yaml

package vt

Versions:

2015.11.10-4,  2015.11.10-3,  2015.11.10-2,  2015.11.10-1,  2015.11.10-0,  0.57721-9,  0.57721-8,  0.57721-7,  0.57721-6, 

2015.11.10-4,  2015.11.10-3,  2015.11.10-2,  2015.11.10-1,  2015.11.10-0,  0.57721-9,  0.57721-8,  0.57721-7,  0.57721-6,  0.57721-5,  0.57721-4,  0.57721-3,  0.57721-2,  0.57721-1,  0.57721-0

Depends:

• htslib >=1.10.2,<1.11.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• pcre2 >=10.35,<10.36.0a0

• zlib >=1.2.11,<1.3.0a0

Required By:

• lorikeet-genome

• cluster_vcf_records

• snippy

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install vt

and update with:

conda update vt

or use the docker container:

docker pull quay.io/biocontainers/vt:<tag>

(see vt/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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