recipe wfmash

A DNA sequence aligner based on mash distances and the wavefront alignment algorithm

Homepage:

https://github.com/ekg/wfmash

License:

MIT

Recipe:

/wfmash/meta.yaml

package wfmash

Versions:

0.8.2-0,  0.8.1-0,  0.8.0-0,  0.7.0-2,  0.7.0-1,  0.7.0-0,  0.6.1-0

Depends:

• gsl >=2.7,<2.8.0a0

• htslib >=1.15.1,<1.16.0a0

• libgcc-ng >=10.3.0

• libjemalloc >=5.2.1

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

Required By:

• pggb

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install wfmash

and update with:

conda update wfmash

or use the docker container:

docker pull quay.io/biocontainers/wfmash:<tag>

(see wfmash/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/wfmash/README.html)