recipe wgs-assembler

Celera Assembler (wgs-assembler) is a de novo whole-genome shotgun (WGS) DNA sequence assembler

Homepage

http://wgs-assembler.sourceforge.net/wiki/index.php?title=Main_Page

License

MIT

Recipe

/wgs-assembler/meta.yaml

package wgs-assembler

(downloads) docker_wgs-assembler

Versions

8.3-0

Depends atac

Depends blasr

Depends estmapper

Depends falcon

Depends jellyfish

Depends libgcc

Depends meryl

Depends pbdagcon

Depends perl

5.22.0*

Depends samtools

Depends sim4db

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install wgs-assembler

and update with:

conda update wgs-assembler

or use the docker container:

docker pull quay.io/biocontainers/wgs-assembler:<tag>

(see wgs-assembler/tags for valid values for <tag>)