whatshap

downloads

phase genomic variants using DNA sequencing reads (haplotype assembly)

Home https://whatshap.readthedocs.io/
Versions 0.11, 0.12, 0.13, 0.14.1, 0.9
License MIT License
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/whatshap

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install whatshap

and update with:

conda update whatshap

docker

A Docker container is available at https://quay.io/repository/biocontainers/whatshap.