whatshap

phase genomic variants using DNA sequencing reads (haplotype assembly)

Home	https://whatshap.readthedocs.io/
Versions	0.11, 0.12, 0.13, 0.9
License	MIT License
Recipe	https://github.com/bioconda/bioconda-recipes/tree/master/recipes/whatshap

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install whatshap

and update with:

conda update whatshap

A Docker container is available at https://quay.io/repository/biocontainers/whatshap.

Link to this page

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