recipe winnowmap

Winnowmap is a long-read mapping algorithm optimized for mapping ONT and PacBio reads to repetitive reference sequences.

Homepage:

https://github.com/marbl/Winnowmap

License:

LicenseRef-Public-Domain AND MIT

Recipe:

/winnowmap/meta.yaml

Links:

doi: 10.1093/bioinformatics/btaa435

package winnowmap

(downloads) docker_winnowmap

Versions:

2.03-12.03-02.02-02.01-02.0-12.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install winnowmap

and update with:

conda update winnowmap

or use the docker container:

docker pull quay.io/biocontainers/winnowmap:<tag>

(see winnowmap/tags for valid values for <tag>)

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