Package Index

2 | a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | w | x | y | z
 
2
2pg_cartesian
 
a
a5-miseq
abacat
abawaca
abeona
abpoa
abra2
abricate
abritamr
abundancebin
abyss
ac
ac-diamond
adam
adapterremoval
adapterremovalfixprefix
addrg
admixtools
admixture
adpred
advntr
afplot
afterqc
agat
age-metasv
agfusion
agg
airr
akt
albatradis
alder
ale
aletsch
alfred
align_it
alignlib-lite
alignstats
allegro
altamisa
amap
amas
amos
amptk
amused
ananse
anarci
andi
angsd
anise_basil
anndata2ri
ant
antarna
antismash
anvio
anvio-minimal
any2fasta
apoc
apollo
apt-probeset-summarize
aquila
aquila_stlfr
aquila_umap
aragorn
arb-bio
arb-bio-devel
arb-bio-tools
arboreto
arcs
arem
argparse2tool
aria2
ariba
array-as-vcf
arriba
art
artemis
artic
artic-porechop
artic-tools
arvados-cli
arvados-cwl-runner
arvados-python-client
ascat
asciigenome
askocli
asn2gb
asqcan
assemblerflow
assembly-scan
assembly-stats
assemblytics
assemblyutility
astalavista
atac
atactk
ataqv
athena_meta
atlas-data-import
atlas-metadata-validator
atropos
augur
augustus
autodock-vina
autolog
avro-cwl
avro-python2
avro-python3
axiome
azure-cli
 
b
backspinpy
bacphlip
bactopia
badread
baitfisher
bam-readcount
bam2fasta
bam2fastx
bambamc
bamclipper
bamhash
bamkit
bamm
bamread
bamscale
bamtools
bamutil
bandage
banner
barcode_splitter
barriers
barrnap
barrnap-python
basic
batvi
bax2bam
bayescan
bayestyper
bazam
bbknn
bbmap
bcalm
bcbio-gff
bcbio-nextgen
bcbio-nextgen-vm
bcbio-prioritize
bcbio-rnaseq
bcbio-variation
bcbio-variation-recall
bcbio_monitor
bcbiogff
bcbreport
bcftools
bcftools-gtc2vcf-plugin
bcftools-snvphyl-plugin
bcl2fastq-nextseq
bcool
bcov
bctools
bd2k-python-lib
beagle
beagle-lib
beast
beast2
bedops
bedparse
bedtools
behst
bel-resources
bellmans-gapc
berokka
besst
bfc
bftools
bgreat
bgt
biasaway
bibliospec
bicseq2-norm
bicseq2-seg
bifrost
bigsi
bindash
binlorry
binsanity
bio-ting
bio-vcf
bio_assembly_refinement
bio_hansel
bioawk
biobambam
biobasehttptools
biobb_adapters
biobb_analysis
biobb_chemistry
biobb_common
biobb_io
biobb_md
biobb_ml
biobb_model
biobb_pmx
biobb_structure_checking
biobb_structure_manager
biobb_structure_utils
biobb_wf_mutations
bioblend
bioconda-utils
bioconda2biocontainer
bioconductor-a4
bioconductor-a4base
bioconductor-a4classif
bioconductor-a4core
bioconductor-a4preproc
bioconductor-a4reporting
bioconductor-abadata
bioconductor-abaenrichment
bioconductor-abarray
bioconductor-abseqr
bioconductor-absseq
bioconductor-acde
bioconductor-ace
bioconductor-acgh
bioconductor-acme
bioconductor-adacgh2
bioconductor-adam
bioconductor-adamgui
bioconductor-adaptest
bioconductor-adductdata
bioconductor-adductomicsr
bioconductor-adme16cod.db
bioconductor-adsplit
bioconductor-affixcan
bioconductor-affxparser
bioconductor-affy
bioconductor-affycomp
bioconductor-affycompatible
bioconductor-affycompdata
bioconductor-affycontam
bioconductor-affycoretools
bioconductor-affydata
bioconductor-affyexpress
bioconductor-affyhgu133a2expr
bioconductor-affyhgu133aexpr
bioconductor-affyhgu133plus2expr
bioconductor-affyilm
bioconductor-affyio
bioconductor-affylmgui
bioconductor-affymetrixdatatestfiles
bioconductor-affymoe4302expr
bioconductor-affypara
bioconductor-affyplm
bioconductor-affyqcreport
bioconductor-affyrnadegradation
bioconductor-ag.db
bioconductor-agcdf
bioconductor-agdex
bioconductor-agilp
bioconductor-agimicrorna
bioconductor-agprobe
bioconductor-ahcytobands
bioconductor-ahensdbs
bioconductor-aims
bioconductor-airway
bioconductor-aldex2
bioconductor-alevinqc
bioconductor-all
bioconductor-allelicimbalance
bioconductor-allmll
bioconductor-alphabeta
bioconductor-alpine
bioconductor-alpinedata
bioconductor-alps
bioconductor-alsace
bioconductor-altcdfenvs
bioconductor-alternativesplicingevents.hg19
bioconductor-alternativesplicingevents.hg38
bioconductor-amaretto
bioconductor-amountain
bioconductor-ampaffyexample
bioconductor-amplican
bioconductor-analysispageserver
bioconductor-anaquin
bioconductor-aneufinder
bioconductor-aneufinderdata
bioconductor-anf
bioconductor-animalcules
bioconductor-annaffy
bioconductor-annmap
bioconductor-annotate
bioconductor-annotationdbi
bioconductor-annotationfilter
bioconductor-annotationforge
bioconductor-annotationfuncs
bioconductor-annotationhub
bioconductor-annotationhubdata
bioconductor-annotationtools
bioconductor-annotatr
bioconductor-anopheles.db0
bioconductor-anota
bioconductor-anota2seq
bioconductor-antiprofiles
bioconductor-antiprofilesdata
bioconductor-anvil
bioconductor-apalyzer
bioconductor-apcomplex
bioconductor-apeglm
bioconductor-appreci8r
bioconductor-arabidopsis.db0
bioconductor-aracne.networks
bioconductor-aroma.light
bioconductor-arrayexpress
bioconductor-arrayexpresshts
bioconductor-arraymvout
bioconductor-arrayquality
bioconductor-arrayqualitymetrics
bioconductor-arraytools
bioconductor-arraytv
bioconductor-arrmdata
bioconductor-arrmnormalization
bioconductor-artms
bioconductor-asafe
bioconductor-aseb
bioconductor-asgsca
bioconductor-ashkenazimsonchr21
bioconductor-asics
bioconductor-asicsdata
bioconductor-aspediafi
bioconductor-aspli
bioconductor-assessorf
bioconductor-assessorfdata
bioconductor-asset
bioconductor-assign
bioconductor-atacseqqc
bioconductor-ath1121501.db
bioconductor-ath1121501cdf
bioconductor-ath1121501probe
bioconductor-atsnp
bioconductor-attract
bioconductor-aucell
bioconductor-autotuner
bioconductor-awfisher
bioconductor-baalchip
bioconductor-bac
bioconductor-bacon
bioconductor-bader
bioconductor-badregionfinder
bioconductor-bags
bioconductor-ballgown
bioconductor-bamsignals
bioconductor-bandits
bioconductor-banocc
bioconductor-barley1cdf
bioconductor-barley1probe
bioconductor-basecallqc
bioconductor-basespacer
bioconductor-basic4cseq
bioconductor-basics
bioconductor-basicstarrseq
bioconductor-basilisk
bioconductor-basilisk.utils
bioconductor-batchelor
bioconductor-batchqc
bioconductor-bayesknockdown
bioconductor-bayespeak
bioconductor-baynorm
bioconductor-bayseq
bioconductor-bbcanalyzer
bioconductor-bcellviper
bioconductor-bcrank
bioconductor-bcseq
bioconductor-bdmmacorrect
bioconductor-beachmat
bioconductor-beadarray
bioconductor-beadarrayexampledata
bioconductor-beadarraysnp
bioconductor-beadarrayusecases
bioconductor-beaddatapackr
bioconductor-bearscc
bioconductor-beat
bioconductor-beclear
bioconductor-benchmarkfdrdata2019
bioconductor-beta7
bioconductor-bgafun
bioconductor-bgeecall
bioconductor-bgeedb
bioconductor-bgmix
bioconductor-bgx
bioconductor-bhc
bioconductor-bicare
bioconductor-bifet
bioconductor-biggr
bioconductor-bigmelon
bioconductor-bigmemoryextras
bioconductor-bigpint
bioconductor-bioassayr
bioconductor-biobase
bioconductor-biobroom
bioconductor-biobtreer
bioconductor-biocancer
bioconductor-bioccasestudies
bioconductor-bioccheck
bioconductor-biocdockermanager
bioconductor-biocfilecache
bioconductor-biocgenerics
bioconductor-biocgraph
bioconductor-biocneighbors
bioconductor-bioconcotk
bioconductor-biocor
bioconductor-biocparallel
bioconductor-biocpkgtools
bioconductor-biocset
bioconductor-biocsingular
bioconductor-biocsklearn
bioconductor-biocstyle
bioconductor-biocversion
bioconductor-biocviews
bioconductor-biocworkflowtools
bioconductor-biodist
bioconductor-biomart
bioconductor-biomformat
bioconductor-biomm
bioconductor-biomvcclass
bioconductor-biomvrcns
bioconductor-bionet
bioconductor-bionetstat
bioconductor-bioqc
bioconductor-bioseqclass
bioconductor-biosigner
bioconductor-biostrings
bioconductor-biosvd
bioconductor-biotip
bioconductor-biotmle
bioconductor-biotmledata
bioconductor-biovizbase
bioconductor-birewire
bioconductor-birta
bioconductor-biscuiteer
bioconductor-biscuiteerdata
bioconductor-biseq
bioconductor-bitseq
bioconductor-blacksheepr
bioconductor-bladderbatch
bioconductor-blima
bioconductor-blimatestingdata
bioconductor-blma
bioconductor-bloodcancermultiomics2017
bioconductor-bnbc
bioconductor-bodymaprat
bioconductor-bovine.db
bioconductor-bovine.db0
bioconductor-bovinecdf
bioconductor-bovineprobe
bioconductor-bprmeth
bioconductor-brain
bioconductor-brainflowprobes
bioconductor-brainimagerdata
bioconductor-brainstars
bioconductor-branchpointer
bioconductor-breakpointr
bioconductor-breakpointrdata
bioconductor-breastcancermainz
bioconductor-breastcancernki
bioconductor-breastcancertransbig
bioconductor-breastcancerunt
bioconductor-breastcancerupp
bioconductor-breastcancervdx
bioconductor-brendadb
bioconductor-brgedata
bioconductor-brgenomics
bioconductor-bridge
bioconductor-bridgedbr
bioconductor-bronchialil13
bioconductor-browserviz
bioconductor-bsgenome
bioconductor-bsgenome.alyrata.jgi.v1
bioconductor-bsgenome.amellifera.beebase.assembly4
bioconductor-bsgenome.amellifera.ucsc.apimel2
bioconductor-bsgenome.amellifera.ucsc.apimel2.masked
bioconductor-bsgenome.aofficinalis.ncbi.v1
bioconductor-bsgenome.athaliana.tair.04232008
bioconductor-bsgenome.athaliana.tair.tair9
bioconductor-bsgenome.btaurus.ucsc.bostau3
bioconductor-bsgenome.btaurus.ucsc.bostau3.masked
bioconductor-bsgenome.btaurus.ucsc.bostau4
bioconductor-bsgenome.btaurus.ucsc.bostau4.masked
bioconductor-bsgenome.btaurus.ucsc.bostau6
bioconductor-bsgenome.btaurus.ucsc.bostau6.masked
bioconductor-bsgenome.btaurus.ucsc.bostau8
bioconductor-bsgenome.btaurus.ucsc.bostau9
bioconductor-bsgenome.carietinum.ncbi.v1
bioconductor-bsgenome.celegans.ucsc.ce10
bioconductor-bsgenome.celegans.ucsc.ce11
bioconductor-bsgenome.celegans.ucsc.ce2
bioconductor-bsgenome.celegans.ucsc.ce6
bioconductor-bsgenome.cfamiliaris.ucsc.canfam2
bioconductor-bsgenome.cfamiliaris.ucsc.canfam2.masked
bioconductor-bsgenome.cfamiliaris.ucsc.canfam3
bioconductor-bsgenome.cfamiliaris.ucsc.canfam3.masked
bioconductor-bsgenome.cjacchus.ucsc.caljac3
bioconductor-bsgenome.dmelanogaster.ucsc.dm2
bioconductor-bsgenome.dmelanogaster.ucsc.dm2.masked
bioconductor-bsgenome.dmelanogaster.ucsc.dm3
bioconductor-bsgenome.dmelanogaster.ucsc.dm3.masked
bioconductor-bsgenome.dmelanogaster.ucsc.dm6
bioconductor-bsgenome.drerio.ucsc.danrer10
bioconductor-bsgenome.drerio.ucsc.danrer11
bioconductor-bsgenome.drerio.ucsc.danrer5
bioconductor-bsgenome.drerio.ucsc.danrer5.masked
bioconductor-bsgenome.drerio.ucsc.danrer6
bioconductor-bsgenome.drerio.ucsc.danrer6.masked
bioconductor-bsgenome.drerio.ucsc.danrer7
bioconductor-bsgenome.drerio.ucsc.danrer7.masked
bioconductor-bsgenome.dvirilis.ensembl.dvircaf1
bioconductor-bsgenome.ecoli.ncbi.20080805
bioconductor-bsgenome.gaculeatus.ucsc.gasacu1
bioconductor-bsgenome.gaculeatus.ucsc.gasacu1.masked
bioconductor-bsgenome.ggallus.ucsc.galgal3
bioconductor-bsgenome.ggallus.ucsc.galgal3.masked
bioconductor-bsgenome.ggallus.ucsc.galgal4
bioconductor-bsgenome.ggallus.ucsc.galgal4.masked
bioconductor-bsgenome.ggallus.ucsc.galgal5
bioconductor-bsgenome.ggallus.ucsc.galgal6
bioconductor-bsgenome.hsapiens.1000genomes.hs37d5
bioconductor-bsgenome.hsapiens.ncbi.grch38
bioconductor-bsgenome.hsapiens.ucsc.hg17
bioconductor-bsgenome.hsapiens.ucsc.hg17.masked
bioconductor-bsgenome.hsapiens.ucsc.hg18
bioconductor-bsgenome.hsapiens.ucsc.hg18.masked
bioconductor-bsgenome.hsapiens.ucsc.hg19
bioconductor-bsgenome.hsapiens.ucsc.hg19.masked
bioconductor-bsgenome.hsapiens.ucsc.hg38
bioconductor-bsgenome.hsapiens.ucsc.hg38.masked
bioconductor-bsgenome.mdomestica.ucsc.mondom5
bioconductor-bsgenome.mfascicularis.ncbi.5.0
bioconductor-bsgenome.mfuro.ucsc.musfur1
bioconductor-bsgenome.mmulatta.ucsc.rhemac10
bioconductor-bsgenome.mmulatta.ucsc.rhemac2
bioconductor-bsgenome.mmulatta.ucsc.rhemac2.masked
bioconductor-bsgenome.mmulatta.ucsc.rhemac3
bioconductor-bsgenome.mmulatta.ucsc.rhemac3.masked
bioconductor-bsgenome.mmulatta.ucsc.rhemac8
bioconductor-bsgenome.mmusculus.ucsc.mm10
bioconductor-bsgenome.mmusculus.ucsc.mm10.masked
bioconductor-bsgenome.mmusculus.ucsc.mm8
bioconductor-bsgenome.mmusculus.ucsc.mm8.masked
bioconductor-bsgenome.mmusculus.ucsc.mm9
bioconductor-bsgenome.mmusculus.ucsc.mm9.masked
bioconductor-bsgenome.osativa.msu.msu7
bioconductor-bsgenome.ptroglodytes.ucsc.pantro2
bioconductor-bsgenome.ptroglodytes.ucsc.pantro2.masked
bioconductor-bsgenome.ptroglodytes.ucsc.pantro3
bioconductor-bsgenome.ptroglodytes.ucsc.pantro3.masked
bioconductor-bsgenome.ptroglodytes.ucsc.pantro5
bioconductor-bsgenome.ptroglodytes.ucsc.pantro6
bioconductor-bsgenome.rnorvegicus.ucsc.rn4
bioconductor-bsgenome.rnorvegicus.ucsc.rn4.masked
bioconductor-bsgenome.rnorvegicus.ucsc.rn5
bioconductor-bsgenome.rnorvegicus.ucsc.rn5.masked
bioconductor-bsgenome.rnorvegicus.ucsc.rn6
bioconductor-bsgenome.scerevisiae.ucsc.saccer1
bioconductor-bsgenome.scerevisiae.ucsc.saccer2
bioconductor-bsgenome.scerevisiae.ucsc.saccer3
bioconductor-bsgenome.sscrofa.ucsc.susscr11
bioconductor-bsgenome.sscrofa.ucsc.susscr3
bioconductor-bsgenome.sscrofa.ucsc.susscr3.masked
bioconductor-bsgenome.tgondii.toxodb.7.0
bioconductor-bsgenome.tguttata.ucsc.taegut1
bioconductor-bsgenome.tguttata.ucsc.taegut1.masked
bioconductor-bsgenome.tguttata.ucsc.taegut2
bioconductor-bsgenome.vvinifera.urgi.iggp12xv0
bioconductor-bsgenome.vvinifera.urgi.iggp12xv2
bioconductor-bsgenome.vvinifera.urgi.iggp8x
bioconductor-bsseq
bioconductor-bsseqdata
bioconductor-bsubtiliscdf
bioconductor-bsubtilisprobe
bioconductor-bubbletree
bioconductor-bufferedmatrix
bioconductor-bufferedmatrixmethods
bioconductor-bumhmm
bioconductor-bumphunter
bioconductor-bus
bioconductor-buscorrect
bioconductor-busparse
bioconductor-cafe
bioconductor-cagefightr
bioconductor-cager
bioconductor-calm
bioconductor-camera
bioconductor-camthc
bioconductor-cancer
bioconductor-cancerclass
bioconductor-cancerdata
bioconductor-cancerinsilico
bioconductor-cancermutationanalysis
bioconductor-cancersubtypes
bioconductor-cand
bioconductor-canine.db
bioconductor-canine.db0
bioconductor-canine2.db
bioconductor-canine2cdf
bioconductor-canine2probe
bioconductor-caninecdf
bioconductor-canineprobe
bioconductor-caomicsv
bioconductor-cardinal
bioconductor-cardinalworkflows
bioconductor-carnival
bioconductor-casper
bioconductor-catalyst
bioconductor-category
bioconductor-categorycompare
bioconductor-causalr
bioconductor-cbaf
bioconductor-cbioportaldata
bioconductor-ccdata
bioconductor-ccfindr
bioconductor-ccl4
bioconductor-ccmap
bioconductor-ccpromise
bioconductor-ccrepe
bioconductor-cctutorial
bioconductor-celaref
bioconductor-celarefdata
bioconductor-celda
bioconductor-celegans.db
bioconductor-celeganscdf
bioconductor-celegansprobe
bioconductor-cellbaser
bioconductor-cellbench
bioconductor-cellhts2
bioconductor-cellity
bioconductor-cellmapper
bioconductor-cellmapperdata
bioconductor-cellmixs
bioconductor-cellnoptr
bioconductor-cellscape
bioconductor-cellscore
bioconductor-celltrails
bioconductor-celltree
bioconductor-cemitool
bioconductor-cernanetsim
bioconductor-cetf
bioconductor-ceu1kg
bioconductor-ceu1kgv
bioconductor-ceuhm3
bioconductor-cexor
bioconductor-cfassay
bioconductor-cgdv17
bioconductor-cgen
bioconductor-cghbase
bioconductor-cghcall
bioconductor-cghmcr
bioconductor-cghnormaliter
bioconductor-cghregions
bioconductor-champ
bioconductor-champdata
bioconductor-charge
bioconductor-chemminedrugs
bioconductor-chemmineob
bioconductor-chemminer
bioconductor-chetah
bioconductor-chic
bioconductor-chic.data
bioconductor-chicago
bioconductor-chicken.db
bioconductor-chicken.db0
bioconductor-chickencdf
bioconductor-chickenprobe
bioconductor-chimera
bioconductor-chimeraviz
bioconductor-chimp.db0
bioconductor-chimphumanbraindata
bioconductor-chipanalyser
bioconductor-chipcomp
bioconductor-chipenrich
bioconductor-chipenrich.data
bioconductor-chipexoqual
bioconductor-chipexoqualexample
bioconductor-chippeakanno
bioconductor-chipqc
bioconductor-chipseeker
bioconductor-chipseq
bioconductor-chipseqdbdata
bioconductor-chipseqr
bioconductor-chipseqspike
bioconductor-chipsim
bioconductor-chipxpress
bioconductor-chipxpressdata
bioconductor-chopsticks
bioconductor-chromdraw
bioconductor-chromheatmap
bioconductor-chromplot
bioconductor-chromstar
bioconductor-chromstardata
bioconductor-chromswitch
bioconductor-chromvar
bioconductor-chronos
bioconductor-cicero
bioconductor-cindex
bioconductor-circrnaprofiler
bioconductor-cispath
bioconductor-citefuse
bioconductor-citruscdf
bioconductor-citrusprobe
bioconductor-clariomdhumanprobeset.db
bioconductor-clariomdhumantranscriptcluster.db
bioconductor-clariomshumanhttranscriptcluster.db
bioconductor-clariomshumantranscriptcluster.db
bioconductor-clariomsmousehttranscriptcluster.db
bioconductor-clariomsmousetranscriptcluster.db
bioconductor-clariomsrathttranscriptcluster.db
bioconductor-clariomsrattranscriptcluster.db
bioconductor-classifyr
bioconductor-cleanupdtseq
bioconductor-cleaver
bioconductor-clippda
bioconductor-clipper
bioconductor-cliquems
bioconductor-cll
bioconductor-cllmethylation
bioconductor-clomial
bioconductor-clonality
bioconductor-clonotyper
bioconductor-clst
bioconductor-clstutils
bioconductor-clumsid
bioconductor-clumsiddata
bioconductor-clustcomp
bioconductor-clusterexperiment
bioconductor-clusterjudge
bioconductor-clusterprofiler
bioconductor-clusterseq
bioconductor-clustersignificance
bioconductor-clusterstab
bioconductor-clustifyr
bioconductor-cma
bioconductor-cmap
bioconductor-cmap2data
bioconductor-cmapr
bioconductor-cn.farms
bioconductor-cn.mops
bioconductor-cnanorm
bioconductor-cner
bioconductor-cnordt
bioconductor-cnorfeeder
bioconductor-cnorfuzzy
bioconductor-cnorode
bioconductor-cntools
bioconductor-cnvfilter
bioconductor-cnvgsa
bioconductor-cnvgsadata
bioconductor-cnvpanelizer
bioconductor-cnvranger
bioconductor-cnvrd2
bioconductor-cnvtools
bioconductor-cobindr
bioconductor-cocitestats
bioconductor-cocoa
bioconductor-codelink
bioconductor-codex
bioconductor-coexnet
bioconductor-cogaps
bioconductor-cogena
bioconductor-cogps
bioconductor-cohcap
bioconductor-cohcapanno
bioconductor-cola
bioconductor-colonca
bioconductor-combi
bioconductor-comet
bioconductor-compartmap
bioconductor-compass
bioconductor-compcoder
bioconductor-compepitools
bioconductor-compgo
bioconductor-complexheatmap
bioconductor-confess
bioconductor-confessdata
bioconductor-connectivitymap
bioconductor-consensus
bioconductor-consensusclusterplus
bioconductor-consensusde
bioconductor-consensusov
bioconductor-consensusseeker
bioconductor-contibait
bioconductor-conumee
bioconductor-convert
bioconductor-copa
bioconductor-copdsexualdimorphism.data
bioconductor-copyhelper
bioconductor-copyneutralima
bioconductor-copynumber
bioconductor-copynumberplots
bioconductor-copywriter
bioconductor-cordon
bioconductor-coregflux
bioconductor-coregnet
bioconductor-coregx
bioconductor-cormotif
bioconductor-cormut
bioconductor-correp
bioconductor-coseq
bioconductor-cosmic.67
bioconductor-cosmiq
bioconductor-cosnet
bioconductor-cottoncdf
bioconductor-cottonprobe
bioconductor-countclust
bioconductor-countsimqc
bioconductor-coveb
bioconductor-coverageview
bioconductor-covrna
bioconductor-cpvsnp
bioconductor-cqn
bioconductor-crcl18
bioconductor-crimage
bioconductor-crisprseek
bioconductor-crisprseekplus
bioconductor-crisprvariants
bioconductor-crlmm
bioconductor-crossicc
bioconductor-crossmeta
bioconductor-csar
bioconductor-csaw
bioconductor-cssp
bioconductor-cssq
bioconductor-ctc
bioconductor-ctggem
bioconductor-ctrap
bioconductor-ctsge
bioconductor-cummerbund
bioconductor-curatedadipoarray
bioconductor-curatedadipochip
bioconductor-curatedadiporna
bioconductor-curatedbladderdata
bioconductor-curatedbreastdata
bioconductor-curatedcrcdata
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bioconductor-human550v3bcrlmm
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bioconductor-humanomniexpress12v1bcrlmm
bioconductor-humanstemcell
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bioconductor-illuminahumanmethylation450kmanifest
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bioconductor-illuminahumanmethylationepicanno.ilm10b2.hg19
bioconductor-illuminahumanmethylationepicanno.ilm10b3.hg19
bioconductor-illuminahumanmethylationepicanno.ilm10b4.hg19
bioconductor-illuminahumanmethylationepicmanifest
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bioconductor-illuminaio
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g
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h
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htsbox
htseq
htslib
htstream
hubward
hubward-all
hulk
humann2
hurry.filesize
hydra-multi
hypercluster
hyphy
hypo
hypro
 
i
ibdne
ibdseq
iced
iclipro
icount
icqsol
idba
idba_subasm
ideas
idr
idr-py
ig-checkfcs
ig-checkflowtypes
ig-flowtools
igblast
igblast-parser
igdiscover
igor_vdj
igphyml
igv
igv-reports
igvtools
illumina-cleanup
illumina-interop
illumina-utils
illuminate
illumiprocessor
im-pipelines
imctools
imfusion
impute2
imseq
imsindel
indelfixer
infernal
influx_si
inforna
inheritance
insilicoseq
instrain
intarna
integron_finder
intemap
interleafq
intermine
intervalstats
intervaltree_bio
intervene
involucro
ipyrad
ipython-cluster-helper
iqtree
ir
irep
irfinder
irida-linker
irida-sistr-results
irida-uploader
irissv
isaac4
isatools
isescan
islandpath
ismapper
isocor
isonclust
isonclust2
isoncorrect
isoquant
isoseq3
ispcr
itero
itolapi
itsx
itsxpress
iucn_sim
iva
ivar
 
j
jaffa
jali
jalview
jamm
jannovar-cli
jarvis
jasmine
jasminesv
jass
jass_preprocessing
jbrowse
jcast
jcvi
je-suite
jgoslin
jmztab-m
jobtree
jolytree
jpredapi
json_collect_data_source
jupyterngsplugin
justbackoff
jvarkit-bam2svg
jvarkit-bam2wig
jvarkit-msa2vcf
 
k
k-slam
k8
kaiju
kalign2
kalign3
kallisto
kaptive
karect
kart
karyopype
kat
kcalign
kcounter
keggcharter
kfoots
kggseq
khmer
kid
kinamine_y_shaker
king
kinsimriboswitch
kipoi
kipoi-utils
kipoi_veff
kipoiseq
kissplice
kiwidist
kleborate
kma
kmasker
kmc
kmer-jellyfish
kmergenie
kmerinshort
kmerstream
kneaddata
knock-knock
knot
kobas
kodoja
koeken
kofamscan
kopt
kounta
kpal
kraken
kraken-biom
kraken-ea
kraken2
krakentools
krakenuniq
krbalancing
krocus
krona
kronik
kronos
kssd
ksw
kwip
kyototycoon
 
l
lace
lamassemble
lambda
lap
last
lastz
latentstrainanalysis
lca
lcfit
ldblockshow
ldhelmet
ldsc
lefse
legsta
lexmapr
libarbdb
libbambamc
libbigwig
libdivsufsort
libgenome
libgtextutils
libidn
libis
libmems
libmuscle
libopenms
libsbml
libsequence
libssw
libstatgen
liftoff
lightassembler
lighter
lightning
lightstringgraph
lima
linkage2allegro
links
livekraken
locarna
locus_processing
lofreq
logol
logomaker
lohhla
longgf
longshot
lordec
lordfast
lorikeet
lorikeet-genome
lorma
lrez
lrzip
ls-gkm
lsc
lsd
ltr_finder
ltr_retriever
luciphor2
lumpy-sv
lusstr
lyner
lz4-bin
 
m
ma
maaslin
maaslin2
macaron
mace
macrel
macs2
macse
mafft
mageck
mageck-vispr
magicblast
magpurify
makehub
maker
malder
malt
malva
mamotif
mango
manorm
manta
mantis
mapcaller
mapdamage2
mapdia
mapgl
mapping-iterative-assembler
mappy
mapsembler2
mapsplice
marge
mark-nonconverted-reads
marvel
mash
mashmap
mashtree
maskrc-svg
mason
masurca
matam
mathstats
matlock
mauve
mauvealigner
mavis
mawk
maxbin2
maxentpy
maxentscan
maxquant
mbg
mbuffer
mccortex
mcl
mdasim
mdust
mea
medaka
medpy
medusa
medusa-data-fusion
megagta
megahit
megalodon
megan
melt
meme
mendelscan
meneco
menetools
mentalist
meraculous
mercat
merfishtools
mergenotcombined
mergevcf
merlin
merqury
meryl
meta-sparse
metabat2
metabinkit
metacherchant
metacluster
metaeuk
metagene_annotator
metagenome-atlas
metalign
metamaps
metameta
metametamerge
metaphlan
metaphlan2
metaphyler
metapop
metaprob
metaprokka
metaquant
metaquantome
metaseq
metaseq-all
metasnv
metasv
metatree
metavelvet
metavelvet-annois
metavelvet-sl
metavelvet-sl-feature-extraction
metavelvet-sl-pipeline
metawatt
metawrap
metaxa
metfrag
methplotlib
methyldackel
methylextract
methylpy
metilene
mfqe
mgf-formatter
mgkit
mglex
mgltools
mgs-canopy
mhap
mhcflurry
mhcnames
mhcnuggets
micall-lite
micro_razers
microbecensus
microhapdb
microhapulator
micropita
midas
migmap
migraine
migrate-n
mikado
mimeo
mimodd
mimseq
minced
mindthegap
minia
minialign
miniasm
minimap
minimap2
minimock
minipolish
minnow
minorseq
mintmap
minvar
minys
mir-prefer
mira
miranda
mirdeep2
mirfix
mirge
mirtop
mirtrace
misopy
mitos
mlpy
mlrho
mlst
mmseqs2
mmvc
mnnpy
moabs
mob_suite
mobidic-mpa
mobster
moca
mockinbird
modeltest-ng
modlamp
mofapy
moff
molpopgen-analysis
monocle3-cli
monovar
moods
moreutils
morpheus
mosaik
mosca
mosdepth
mothur
motifraptor
motifscan
motus
mp3treesim
mpa-portable
mpa-server
mpra-data-access-portal
mqc
mrbayes
mreps
mrsfast
ms
ms2pip
msaboot
msaconverter
msalign2
msaprobs
msgf_plus
msisensor
msisensor-pro
msms
msp2db
msproteomicstools
msstitch
mtb-snp-it
mtbseq
mtglink
mtnucratio
mtsv
mtsv-tools
mugsy
multigps
multiqc
multiqc-bcbio
multivcfanalyzer
multiz
mummer
mummer4
muscle
muse
music
music-deconvolution
musicc
mustang
mutmap
mutscan
mvicuna
mvp
mwga-utils
mygene
mykatlas
mykrobe
myriad
mzml2isa
mztosqlite
 
n
n50
nanoblaster
nanocall
nanocomp
nanocompore
nanofilt
nanoget
nanolyse
nanomath
nanomod
nanonet
nanoplexer
nanoplot
nanoplotter
nanopolish
nanopolishcomp
nanopore_simulation
nanoqc
nanoraw
nanosim
nanosim-h
nanosplit
nanostat
nanosv
nanovar
nasp
ncbi-acc-download
ncbi-amrfinderplus
ncbi-genome-download
ncbi-ngs-sdk
ncbi-util-legacy
ncbi-vdb
ncbimeta
ncbitk
ncfp
ncls
ncrf
ndex-python
neatms
nebulizer
necat
negative_training_sampler
nemo
nemo-age
neptune
netcdf-metadata-info
networkxgmml
newick_utils
nextflow
nextgenmap
nf-core
ngless
ngmerge
ngmlr
ngs-bits
ngs-disambiguate
ngsderive
ngsep
ngseqbasic
ngshmmalign
ngsutils
niemads
nim-falcon
nimnexus
nlstradamus
nmrglue
nmrml2isa
nmrpro
nonpareil
norns
nose-capturestderr
novasplice
novoalign
novobreak
novoplasty
np-likeness-scorer
npinv
npyscreen
nseg
nspdk
ntcard
ntedit
nthits
ntjoin
nucamino
nucdiff
nucleoatac
nucleosome_prediction
nudup
nullarbor
nvc
nxtrim
 
o
oases
obitools
ococo
ocrad
octopus
odgi
odose
ogdf
oligoarrayaux
oligotyping
omero-py
omssa
oncofuse
oncogemini
oncopipe
oncotator
ont-fast5-api
ont-tombo
onto2nx
opencontactcli
openmg
openms
openms-meta
openms-thirdparty
openslide-python
opentargets
opentargets-urlzsource
opentargets-validator
opsin
optbuild
optimir
optitype
optplus
orfm
orfquant
orthofinder
orthomcl
osra
outrigger
 
p
pacbio_falcon
pafpy
pairix
pairsnp
pairtools
pal2nal