- recipe abyss
Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
- Homepage:
- Documentation:
- Developer docs:
- License:
GPL-3.0-only
- Recipe:
- Links:
biotools: abyss, doi: 10.1101/gr.214346.116, doi: 10.1101/gr.089532.108
- package abyss¶
-
- Versions:
2.3.5-1
,2.3.5-0
,2.3.4-1
,2.3.4-0
,2.3.3-1
,2.3.3-0
,2.3.2-0
,2.3.1-0
,2.3.0-0
,2.3.5-1
,2.3.5-0
,2.3.4-1
,2.3.4-0
,2.3.3-1
,2.3.3-0
,2.3.2-0
,2.3.1-0
,2.3.0-0
,2.2.5-1
,2.2.5-0
,2.2.4-0
,2.2.3-2
,2.2.3-1
,2.2.3-0
,2.2.2-0
,2.2.1-0
,2.1.5-1
,2.1.5-0
,2.1.4-0
,2.1.3-0
,2.1.1-0
,2.1.0-0
,2.0.2-5
,2.0.2-4
,2.0.2-3
,2.0.2-2
,2.0.2-1
,2.0.2-0
,2.0.1-2
,2.0.1-1
,2.0.1-0
,1.9.0-7
,1.9.0-6
,1.9.0-5
,1.9.0-4
,1.9.0-3
,1.9.0-2
,1.9.0-1
,1.9.0-0
,1.5.2-5
,1.5.2-4
,1.5.2-3
,1.5.2-2
,1.5.2-1
,1.5.2-0
- Depends:
libgcc-ng
>=12
libstdcxx-ng
>=12
openmpi
>=4.1.4,<5.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install abyss
and update with:
conda update abyss
or use the docker container:
docker pull quay.io/biocontainers/abyss:<tag>
(see abyss/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/abyss/README.html)