recipe adapterremovalfixprefix

Fixes adapter removal prefixes to make sure no clashing read names are in the output.

Homepage:

https://github.com/apeltzer/AdapterRemovalFixPrefix

License:

GPLv3

Recipe:

/adapterremovalfixprefix/meta.yaml

package adapterremovalfixprefix

(downloads) docker_adapterremovalfixprefix

versions:

0.0.5-2,  0.0.5-1,  0.0.5-0,  0.0.4-1,  0.0.4-0

depends openjdk:

depends python:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install adapterremovalfixprefix

and update with::

   mamba update adapterremovalfixprefix

To create a new environment, run:

mamba create --name myenvname adapterremovalfixprefix

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/adapterremovalfixprefix:<tag>

(see `adapterremovalfixprefix/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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