recipe agfusion

Python package to annotate and visualize gene fusions.

Homepage

https://github.com/murphycj/AGFusion

License

MIT / MIT

Recipe

/agfusion/meta.yaml

package agfusion

(downloads) docker_agfusion

Versions

1.231-0, 1.23-0, 1.2-2, 1.2-0, 1.0-0

Depends biopython

>=1.67

Depends future

>=0.16.0

Depends matplotlib

>=1.5.0

Depends nose2

>=0.6.5

Depends pandas

>=0.18.1

Depends pyensembl

>=1.1.0

Depends python

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install agfusion

and update with:

conda update agfusion

or use the docker container:

docker pull quay.io/biocontainers/agfusion:<tag>

(see agfusion/tags for valid values for <tag>)