recipe alder

The ALDER software computes the weighted linkage disequilibrium (LD) statistic for making inference about population admixture



Custom OSS




biotools: alder, doi: 10.1534/genetics.112.147330

package alder

(downloads) docker_alder



depends _openmp_mutex:


depends fftw:


depends libgcc-ng:


depends liblapack:


depends libstdcxx-ng:




You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install alder

and update with::

   mamba update alder

To create a new environment, run:

mamba create --name myenvname alder

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `alder/tags`_ for valid values for ``<tag>``)

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