recipe anansescanpy

implementation of scANANSE for scanpy objects in Python

Homepage:

https://github.com/Arts-of-coding/AnanseScanpy

License:

Apache-2.0

Recipe:

/anansescanpy/meta.yaml

package anansescanpy

versions:

1.0.0-1,  1.0.0-0,  0.2.6-0,  0.2.3-0,  0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.9-0,  0.1.8-0, 

1.0.0-1,  1.0.0-0,  0.2.6-0,  0.2.3-0,  0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.9-0,  0.1.8-0,  0.1.5-0,  0.1.4-0,  0.1.2-0

depends anndata:

>=0.8.0

depends numba:

>=0.56.3

depends numpy:

>=1.23.3,<1.24

depends packaging:

>=21.3

depends pandas:

>=1.4.4

depends python:

>=3.8

depends scanpy:

>=1.9.1

depends scipy:

>=1.9.1

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install anansescanpy

and update with::

   mamba update anansescanpy

To create a new environment, run:

mamba create --name myenvname anansescanpy

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/anansescanpy:<tag>

(see `anansescanpy/tags`_ for valid values for ``<tag>``)

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